Chemistry and Physics

2023

Azomethine Ylides—Versatile Synthons for Pyrrolidinyl-Heterocyclic Compounds

Panda, S. S., Aziz, M. N., Stawinski, J. & Girgis, A. S., Jan 2023, In: Molecules. 28, 2, 668.

Research output: Contribution to journal › Review article › peer-review

Open Access

4 Scopus citations

DNA Gyrase as a Target for Quinolones

Spencer, A. C. & Panda, S. S., Feb 2023, In: Biomedicines. 11, 2, 371.

Research output: Contribution to journal › Review article › peer-review

Open Access

4 Scopus citations

Enhanced mechanical heterogeneity of cell collectives due to temporal fluctuations in cell elasticity

Zills, G., Datta, T. & Malmi-Kakkada, A. N., Jan 2023, In: Physical Review E. 107, 1, 014401.

Research output: Contribution to journal › Article › peer-review

Evaluation of Atmospheric Conditions Leading to a Fumigation Event

Viner, B., Weinbeck, S. & Sobecki, C., Oct 1 2023, In: Health physics. 125, 4, p. 305-311 7 p.

Research output: Contribution to journal › Article › peer-review

Investigation of effects of transferrin-conjugated gold nanoparticles on hippocampal neuronal activity and anxiety behavior in mice

Yavuz, Y., Yesilay, G., Guvenc Tuna, B., Maharramov, A., Culha, M., Erdogan, C. S., Garip, G. A. & Yilmaz, B., Aug 2023, In: Molecular and Cellular Biochemistry. 478, 8, p. 1813-1824 12 p.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Mapping the Spatial Footprint of Sea Breeze Winds in the Southeastern United States

Bao, S., Pietrafesa, L., Gayes, P., Noble, S., Viner, B., Qian, J. H., Werth, D., Mitchell, G. & Burdette, S., Apr 16 2023, In: Journal of Geophysical Research D: Atmospheres. 128, 7, e2022JD037524.

Research output: Contribution to journal › Article › peer-review

Open Access

New NSAID Conjugates as Potent and Selective COX-2 Inhibitors: Synthesis, Molecular Modeling and Biological Investigation

Bokhtia, R. M., Panda, S. S., Girgis, A. S., Samir, N., Said, M. F., Abdelnaser, A., Nasr, S., Bekheit, M. S., Dawood, A. S., Sharma, H., Wade, M., Sharma, S. K. & Ghanim, A. M., Feb 2023, In: Molecules. 28, 4, 1945.

Research output: Contribution to journal › Article › peer-review

Open Access

PREFACE

Panda, S. S., Feb 2023, In: Mini-Reviews in Organic Chemistry. 20, 1, p. 2 1 p.

Research output: Contribution to journal › Editorial › peer-review

Raman spectroscopy of bimagnon and trimagnon excitations and rotonlike points in a distorted triangular lattice antiferromagnet

Li, J., Jin, S., Datta, T. & Yao, D. X., May 1 2023, In: Physical Review B. 107, 18, 184402.

Research output: Contribution to journal › Article › peer-review

Spirooxindole: A Versatile Biologically Active Heterocyclic Scaffold

Panda, S. S., Girgis, A. S., Aziz, M. N. & Bekheit, M. S., Jan 2023, In: Molecules. 28, 2, 618.

Research output: Contribution to journal › Review article › peer-review

Open Access

4 Scopus citations

2022

Ab initio study of spin fluctuations in the itinerant kagome magnet FeSn

Zhang, Y. F., Ni, X. S., Datta, T., Wang, M., Yao, D. X. & Cao, K., Nov 1 2022, In: Physical Review B. 106, 18, 184422.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Adhesion strength between cells regulate nonmonotonic growth by a biomechanical feedback mechanism

Malmi-Kakkada, A. N., Sinha, S., Li, X. & Thirumalai, D., Oct 4 2022, In: Biophysical Journal. 121, 19, p. 3719-3729 11 p.

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Cell clusters softening triggers collective cell migration in vivo

Marchant, C. L., Malmi-Kakkada, A. N., Espina, J. A. & Barriga, E. H., Nov 2022, In: Nature Materials. 21, 11, p. 1314-1323 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

14 Scopus citations

Design, Synthesis, and Molecular Docking Studies of Curcumin Hybrid Conjugates as Potential Therapeutics for Breast Cancer

Panda, S. S., Tran, Q. L., Rajpurohit, P., Pillai, G. G., Thomas, S. J., Bridges, A. E., Capito, J. E., Thangaraju, M. & Lokeshwar, B. L., Apr 2022, In: Pharmaceuticals. 15, 4, 451.

Research output: Contribution to journal › Article › peer-review

Open Access

8 Scopus citations

Design and synthesis of ibuprofen-quinoline conjugates as potential anti-inflammatory and analgesic drug candidates

Ghanim, A. M., Girgis, A. S., Kariuki, B. M., Samir, N., Said, M. F., Abdelnaser, A., Nasr, S., Bekheit, M. S., Abdelhameed, M. F., Almalki, A. J., Ibrahim, T. S. & Panda, S. S., Feb 2022, In: Bioorganic Chemistry. 119, 105557.

Research output: Contribution to journal › Article › peer-review

16 Scopus citations

Development of a SERS based cancer diagnosis approach employing cryosectioned thyroid tissue samples on PDMS

Mert, S., Sancak, S., Aydın, H., Fersahoğlu, A. T., Somay, A., Özkan, F. & Çulha, M., Aug 2022, In: Nanomedicine: Nanotechnology, Biology, and Medicine. 44, 102577.

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

Development of Isatin-Based Schiff Bases Targeting VEGFR-2 Inhibition: Synthesis, Characterization, Antiproliferative Properties, and QSAR Studies

Seliem, I. A., Panda, S. S., Girgis, A. S., Tran, Q. L., Said, M. F., Bekheit, M. S., Abdelnaser, A., Nasr, S., Fayad, W., Soliman, A. A. F., Sakhuja, R., Ibrahim, T. S., Abdel-Samii, Z. K. M. & Al-Mahmoudy, A. M. M., Jul 5 2022, In: ChemMedChem. 17, 13, e202200164.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Development of spiro-3-indolin-2-one containing compounds of antiproliferative and anti-SARS-CoV-2 properties

Fawazy, N. G., Panda, S. S., Mostafa, A., Kariuki, B. M., Bekheit, M. S., Moatasim, Y., Kutkat, O., Fayad, W., El-Manawaty, M. A., Soliman, A. A. F., El-Shiekh, R. A., Srour, A. M., Barghash, R. F. & Girgis, A. S., Dec 2022, In: Scientific reports. 12, 1, 13880.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

Discovery of Highly Potent Fusion Inhibitors with Potential Pan-Coronavirus Activity That Effectively Inhibit Major COVID-19 Variants of Concern (VOCs) in Pseudovirus-Based Assays

Curreli, F., Ahmed, S., Victor, S. M. B., Drelich, A., Panda, S. S., Altieri, A., Kurkin, A. V., Tseng, C. T. K., Hillyer, C. D. & Debnath, A. K., Jan 2022, In: Viruses. 14, 1, 69.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Discrimination of Receptor-Mediated Endocytosis by Surface-Enhanced Raman Scattering

Yilmaz, D. & Culha, M., May 24 2022, In: Langmuir. 38, 20, p. 6281-6294 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

Editorial: Current approaches in infectious disease drug discovery

Silva-Jr, F. P., Panda, S. S., Andrade, C. H. & Furnham, N., Nov 30 2022, In: Frontiers in Chemistry. 10, 1102402.

Research output: Contribution to journal › Editorial › peer-review

Open Access

Effective curved space-time geometric theory of generic-twist-angle graphene with application to a rotating bilayer configuration

Ma, J. Z., Datta, T. & Yao, D. X., Jun 15 2022, In: Physical Review B. 105, 24, 245102.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Glass-Based Devices to Generate Drops and Emulsions

Guerrero, J., Rojo, J., de La Cotte, A., Vila, E. & Fernandez-Nieves, A., Apr 2022, In: Journal of Visualized Experiments. 2022, 182, e63376.

Research output: Contribution to journal › Article › peer-review

Gold nanoparticles conjugated DNA-tile nanomaterials for simultaneous delivery of morpholino antisense oligonucleotides and doxorubicin

Tunc, C. U. & Culha, M., Aug 2022, In: Journal of Drug Delivery Science and Technology. 74, 103546.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Investigation of Pr³⁺ Near-Infrared Emission in Plasmonic and Dichroic Copper Nanocomposite Glasses

Jiménez, J. A., May 2022, In: Journal of Inorganic and Organometallic Polymers and Materials. 32, 5, p. 1616-1623 8 p.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Label-Free Surface Enhanced Raman Spectroscopy for Cancer Detection

Avci, E., Yilmaz, H., Sahiner, N., Tuna, B. G., Cicekdal, M. B., Eser, M., Basak, K., Altıntoprak, F., Zengin, I., Dogan, S. & Çulha, M., Oct 2022, In: Cancers. 14, 20, 5021.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

Modified Curcumins as Potential Drug Candidates for Breast Cancer: An Overview

Flint, A. L., Hansen, D. W., Brown, L. V. D., Stewart, L. E., Ortiz, E. & Panda, S. S., Dec 2022, In: Molecules. 27, 24, 8891.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Novel Curcumin Mimics: Design, Synthesis, Biological Properties and Computational Studies of Piperidone-Piperazine Conjugates

Youssef, M. A., Panda, S. S., Aboshouk, D. R., Said, M. F., El Taweel, A., GabAllah, M., Fayad, W., Soliman, A. F., Mostafa, A., Fawzy, N. G. & Girgis, A. S., Aug 19 2022, In: ChemistrySelect. 7, 31, e202201406.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Physico-chemical analysis of white light-emitting Eu, Dy and Cu tri-doped plasmonic glasses synthesized via nanodiamond

Sendova, M., Jiménez, J. A. & Laughrey, C., Sep 1 2022, In: Solid State Communications. 352, 114840.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Physico-chemical properties of international simple glass (ISG) nuclear waste simulants: Luminescence baseline study

Jiménez, J. A., Crawford, C. L. & Lascola, R. J., Jun 2022, In: Journal of the American Ceramic Society. 105, 6, p. 4009-4026 18 p.

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Rapid optical plasmonic transformation of silver-doped glass

Sendova, M., Mancini, M. & Jiménez, J. A., Jun 2022, In: Journal of Thermal Analysis and Calorimetry. 147, 11, p. 6161-6166 6 p.

Research output: Contribution to journal › Article › peer-review

Synthesis, Antibacterial Evaluation, and Computational Studies of a Diverse Set of Linezolid Conjugates

Bokhtia, R. M., Girgis, A. S., Ibrahim, T. S., Rasslan, F., Nossier, E. S., Barghash, R. F., Sakhuja, R., Abdel-Aal, E. H., Panda, S. S. & Al-Mahmoudy, A. M. M., Feb 2022, In: Pharmaceuticals. 15, 2, 191.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Synthesis of Potential Antiviral Agents for SARS-CoV-2 Using Molecular Hybridization Approach

Wyman, K. A., Girgis, A. S., Surapaneni, P. S., Moore, J. M., Abo Shama, N. M., Mahmoud, S. H., Mostafa, A., Barghash, R. F., Juan, Z., Dobaria, R. D., Almalki, A. J., Ibrahim, T. S. & Panda, S. S., Sep 2022, In: Molecules. 27, 18, 5923.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

Unraveling the role of Au clusters vs. plasmonic particles on the defects-induced Mn²⁺luminescence promoted by Si in phosphate glass

Jiménez, J. A., Apr 2022, In: Materials Research Bulletin. 148, 111695.

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Ursolic Acid Analogs as Potential Therapeutics for Cancer

Panda, S. S., Thangaraju, M. & Lokeshwar, B. L., Dec 2022, In: Molecules. 27, 24, 8981.

Research output: Contribution to journal › Review article › peer-review

Open Access

7 Scopus citations

2021

3-Alkenyl-2-oxindoles: Synthesis, antiproliferative and antiviral properties against SARS-CoV-2

Girgis, A. S., Panda, S. S., Srour, A. M., Abdelnaser, A., Nasr, S., Moatasim, Y., Kutkat, O., El Taweel, A., Kandeil, A., Mostafa, A., Ali, M. A., Fawzy, N. G., Bekheit, M. S., Shalaby, E. S. M., Gigli, L., Fayad, W. & Soliman, A. A. F., Sep 2021, In: Bioorganic Chemistry. 114, 105131.

Research output: Contribution to journal › Article › peer-review

20 Scopus citations

Band gap analysis and correlation with glass structure in phosphate glasses melted with various allotropes of carbon

Sendova, M. & Jiménez, J. A., Jul 1 2021, In: Chemical Physics. 547, 111207.

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

Bicyclic 6-6 Systems With One Bridgehead (Ring Junction) Nitrogen Atom: Four Extra Heteroatoms 2:2

Panda, S. S. & Carr, J. A., Jan 1 2021, Comprehensive Heterocyclic Chemistry IV. Elsevier, p. 297-304 8 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Crystal structure of 1-(2-(4-bromophenyl)-2,3-dihydro-1H-benzo[e]indol-1-yl)-naphthalen-2-ol-dichloromethane-dimethyl sulfoxide (1/1/1), C₂₈H₁₈BrNO·CH₂Cl₂·C₂H₆SO

Zhu, L., Wang, J., Zhao, J. & Miao, S., Dec 1 2021, In: Zeitschrift fur Kristallographie - New Crystal Structures. 236, 6, p. 1239-1241 3 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Einstein-de Haas effect of topological magnons

Li, J., Datta, T. & Yao, D. X., Jun 2021, In: Physical Review Research. 3, 2, 023248.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Feasibility of a reusable radiochromic dosimeter

Newton, J. R., Recht, M., Hauger, J. A., Segarra, G., Inglett, C., Romo, P. A. & Adamovics, J., Nov 1 2021, In: Applied Sciences (Switzerland). 11, 21, 9906.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

Fluoroquinolone-3-carboxamide amino acid conjugates: Synthesis, antibacterial properties and molecular modeling studies

Bokhtia, R. M., Panda, S. S., Girgis, A. S., Honkanadavar, H. H., Ibrahim, T. S., George, R. F., Kashef, M. T., Fayad, W., Sakhuja, R., Abdel-Aal, E. H. & Al-Mahmoudy, A. M. M., 2021, In: Medicinal Chemistry. 17, 1, p. 71-84 14 p.

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Interparticle Adhesion Regulates the Surface Roughness of Growing Dense Three-Dimensional Active Particle Aggregates

Sinha, S. & Malmi-Kakkada, A. N., Sep 9 2021, In: Journal of Physical Chemistry B. 125, 37, p. 10445-10451 7 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Massive electrons and unconventional room-temperature superconductivity in superhydrides

De Silva, T. N., Jul 1 2021, In: Physical Review B. 104, 2, 024503.

Research output: Contribution to journal › Article › peer-review

Mechanical heterogeneity along single cell-cell junctions is driven by lateral clustering of cadherins during vertebrate axis elongation

Huebner, R. J., Malmi-Kakkada, A. N., Sarıkaya, S., Weng, S., Thirumalai, D. & Wallingford, J. B., May 25 2021, In: eLife.

Research output: Contribution to journal › Article › peer-review

19 Scopus citations

Microtubule deacetylation reduces cell stiffness to allow the onset of collective cell migration in vivo

Marchant, CL., Malmi-Kakkada, AN., Espina, JA. & Barriga, EH., Aug 12 2021, (Submitted)

Research output: Other contribution

New Pyrazine Conjugates: Synthesis, Computational Studies, and Antiviral Properties against SARS-CoV-2

Seliem, I. A., Girgis, A. S., Moatasim, Y., Kandeil, A., Mostafa, A., Ali, M. A., Bekheit, M. S. & Panda, S. S., Nov 19 2021, In: ChemMedChem. 16, 22, p. 3418-3427 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

13 Scopus citations

New quinoline-triazole conjugates: Synthesis, and antiviral properties against SARS-CoV-2

Seliem, I. A., Panda, S. S., Girgis, A. S., Moatasim, Y., Kandeil, A., Mostafa, A., Ali, M. A., Nossier, E. S., Rasslan, F., Srour, A. M., Sakhuja, R., Ibrahim, T. S., Abdel-samii, Z. K. M. & Al-Mahmoudy, A. M. M., Sep 2021, In: Bioorganic Chemistry. 114, 105117.

Research output: Contribution to journal › Article › peer-review

Open Access

35 Scopus citations

Pd²⁺-induced quenching of the UV emission from Gd³⁺ ions in phosphate glass

Jiménez, J. A. & Rutland, H., Mar 15 2021, In: Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy. 249, 119357.

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Plant-based natural products and extracts: Potential source to develop new antiviral drug candidates

Thomas, E., Stewart, L. E., Darley, B. A., Pham, A. M., Esteban, I. & Panda, S. S., Oct 1 2021, In: Molecules. 26, 20, 6197.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Chemistry and Physics

Research output

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