TY - JOUR
T1 - Assessment of chemical exchange in tryptophan-albumin solution through 19F multicomponent transverse relaxation dispersion analysis
AU - Lin, Ping Chang
N1 - Funding Information:
This project was supported in part by Georgetown University Subgrant RX-4004-043-HU under National Center for Advancing Translational Sciences/NIH (8 UL1 TR000101-03), National Institute on Minority Health and Health Disparities/NIH (G12 MD007597), and US Army Medical Research and Material Command (W81XWH-10-1-0767).
Publisher Copyright:
© 2015 Springer Science+Business Media Dordrecht.
PY - 2015/6/4
Y1 - 2015/6/4
N2 - A number of NMR methods possess the capability of probing chemical exchange dynamics in solution. However, certain drawbacks limit the applications of these NMR approaches, particularly, to a complex system. Here, we propose a procedure that integrates the regularized nonnegative least squares (NNLS) analysis of multiexponential T2 relaxation into Carr-Purcell-Meiboom-Gill (CPMG) relaxation dispersion experiments to probe chemical exchange in a multicompartmental system. The proposed procedure was validated through analysis of 19F T2 relaxation data of 6-fluoro-DL-tryptophan in a two-compartment solution with and without bovine serum albumin. Given the regularized NNLS analysis of a T2 relaxation curve acquired, for example, at the CPMG frequency υ CPMG = 125, the nature of two distinct peaks in the associated T2 distribution spectrum indicated 6-fluoro-DL-tryptophan either retaining the free state, with geometric mean/∗multiplicative standard deviation (MSD) = 1851.2 ms/1.51, or undergoing free/albumin-bound interconversion, with geometric mean/∗MSD = 236.8 ms∗/1.54, in the two-compartment system. Quantities of the individual tryptophan species were accurately reflected by the associated T2 peak areas, with an interconversion state-to-free state ratio of 0.45 ± 0.11. Furthermore, the CPMG relaxation dispersion analysis estimated the exchange rate between the free and albumin-bound states in this fluorinated tryptophan analog and the corresponding dissociation constant of the fluorinated tryptophan-albumin complex in the chemical-exchanging, two-compartment system.
AB - A number of NMR methods possess the capability of probing chemical exchange dynamics in solution. However, certain drawbacks limit the applications of these NMR approaches, particularly, to a complex system. Here, we propose a procedure that integrates the regularized nonnegative least squares (NNLS) analysis of multiexponential T2 relaxation into Carr-Purcell-Meiboom-Gill (CPMG) relaxation dispersion experiments to probe chemical exchange in a multicompartmental system. The proposed procedure was validated through analysis of 19F T2 relaxation data of 6-fluoro-DL-tryptophan in a two-compartment solution with and without bovine serum albumin. Given the regularized NNLS analysis of a T2 relaxation curve acquired, for example, at the CPMG frequency υ CPMG = 125, the nature of two distinct peaks in the associated T2 distribution spectrum indicated 6-fluoro-DL-tryptophan either retaining the free state, with geometric mean/∗multiplicative standard deviation (MSD) = 1851.2 ms/1.51, or undergoing free/albumin-bound interconversion, with geometric mean/∗MSD = 236.8 ms∗/1.54, in the two-compartment system. Quantities of the individual tryptophan species were accurately reflected by the associated T2 peak areas, with an interconversion state-to-free state ratio of 0.45 ± 0.11. Furthermore, the CPMG relaxation dispersion analysis estimated the exchange rate between the free and albumin-bound states in this fluorinated tryptophan analog and the corresponding dissociation constant of the fluorinated tryptophan-albumin complex in the chemical-exchanging, two-compartment system.
KW - Complex system
KW - Kinetics
KW - Multiexponential
KW - Nonnegative least squares analysis
KW - Protein-ligand interaction
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U2 - 10.1007/s10858-015-9929-4
DO - 10.1007/s10858-015-9929-4
M3 - Article
C2 - 25900068
AN - SCOPUS:84930380027
SN - 0925-2738
VL - 62
SP - 121
EP - 127
JO - Journal of Biomolecular NMR
JF - Journal of Biomolecular NMR
IS - 2
ER -