TY - GEN
T1 - Exploratory tools for follow-up studies to microarray experiments
AU - Sinha, Kaushik
AU - Ruoming, Jin
AU - Agrawal, Gagan
AU - Piontkivska, Helen
N1 - DBLP's bibliographic metadata records provided through http://dblp.org/search/publ/api are distributed under a Creative Commons CC0 1.0 Universal Public Domain Dedication. Although the bibliographic metadata records are provided consistent with CC0 1.0 Dedication, the content described by the metadata records is not. Content may be subject to copyright, rights of privacy, rights of publicity and other restrictions.
PY - 2006
Y1 - 2006
N2 - In this paper we present two different exploratory tools for data analysis following a gene microarray experiment. The first tool is based on a novel data mining formulation, called hypergraph mining. In the second tool, we provide a family of expectation based similarity measures between sets of genes or between a set and a single gene. We have evaluated these two tools using output from two different microarray studies. We showed how many interesting observations could be made using our tools, and how the results from the two tools were similar in many ways.
AB - In this paper we present two different exploratory tools for data analysis following a gene microarray experiment. The first tool is based on a novel data mining formulation, called hypergraph mining. In the second tool, we provide a family of expectation based similarity measures between sets of genes or between a set and a single gene. We have evaluated these two tools using output from two different microarray studies. We showed how many interesting observations could be made using our tools, and how the results from the two tools were similar in many ways.
UR - http://www.scopus.com/inward/record.url?scp=34547407670&partnerID=8YFLogxK
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U2 - 10.1109/BIBE.2006.253319
DO - 10.1109/BIBE.2006.253319
M3 - Conference contribution
SN - 0769527272
SN - 9780769527277
T3 - Proceedings - Sixth IEEE Symposium on BioInformatics and BioEngineering, BIBE 2006
SP - 81
EP - 85
BT - Proceedings - Sixth IEEE Symposium on BioInformatics and BioEngineering, BIBE 2006
T2 - 6th IEEE Symposium on BioInformatics and BioEngineering, BIBE 2006
Y2 - 16 October 2006 through 18 October 2006
ER -