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Analyzing the Semantics of Patient Data to Rank Records of Literature Retrieval

  • Eneida A. Mendonça
    ,
  • Stephen B. Johnson
    ,
  • ,
  • James J. Cimino
  • Columbia University
Scholary Output:
Contribution to journal
Conference article
Peer-review

Related Event

Title

ACL 2002 Workshop on Natural Language Processing in the Biomedical Domain

Event type

Conference

Date

07/11/2002

Location

PhiladelphiaUnited States

Abstract

We describe the use of clinical data present in the medical record to determine the relevance of research evidence from literature databases. We studied the effect of using automated knowledge approaches as compared to physician's selection of articles, when using a traditional information retrieval system. Three methods were evaluated. The first method identified terms and their semantics and relationships in the patient's record to build a map of the record, which was represented in conceptual graph notation. This approach was applied to data in an individual's medical record and used to score citations retrieved using a graph matching algorithm. The second method identified associations between terms in the medical record, assigning them semantic types and weights based on the co-occurrence of these associations in citations of biomedical literature. The method was applied to data in an individual's medical record and used to score citations. The last method combined the first two. The results showed that physicians agreed better with each other than with the automated methods. However, we found a significant positive relation between physicians' selection of abstracts and two of the methods. We believe the results encourage the use of clinical data to determine the relevance of medical literature to the care of individual patients.

Publication Information

Output type

Scholary Output:
Contribution to journal
Conference article
Peer-review

Original language

English (US)

Pages from-to (Number of pages)

Pages 69-76 (8 pages)

Journal (Volume, Issue Number)

Proceedings of the Annual Meeting of the Association for Computational Linguistics

Publication milestones

  • Published - 2002

Publication status

Published - 2002

ISSN

0736-587X

Publication IDs

  • Scopus: 0842339535

Publication metrics

Metrics

Fractional count
1
Fractional count
0.25
Fractional count
3
Fractional count
0.75
Fractional count
1
Fractional count
1
Scopus
citations

PlumX

Citation count
5